Gene Overview 
General information
- Gene id
- PT01G46630
- Species
- Populus trichocarpa
- Transcript
- PT01G46630.1
- Coordinates
- 47713631 - 47716575
- Strand
- positive
- Chromosome
- scaffold_1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000846 130 genes in 23 species
- Sub family
- ORTHO001431 38 genes in 19 species
- Duplication type
- Block duplicate
- Description
- PACid=17321096;name=POPTR_0001s47580;alias=pt038568m,eugene3.00013109;
- Comment
- transcripteqprotein_id17321096Protein informationCannot create amino acid sequence
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019782 WD40 repeat 2 IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup