Gene Overview 
General information
- Gene id
- PT01G30950
- Species
- Populus trichocarpa
- Transcript
- PT01G30950.1
- Coordinates
- 30074897 - 30075574
- Strand
- negative
- Chromosome
- scaffold_1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000013 2150 genes in 25 species
- Sub family
- ORTHO009301 20 genes in 16 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- PACid=17302158;name=POPTR_0001s31710;alias=pt040044m,fgenesh4_pg.C_LG_I002524;
- Comment
- transcripteqprotein_id17302158Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR018957 Zinc finger, C3HC4 RING-type IPR001841 Zinc finger, RING-type