Gene Overview 
General information
- Gene id
- PT01G15090
- Species
- Populus trichocarpa
- Transcript
- PT01G15090.1
- Coordinates
- 12111089 - 12113226
- Strand
- positive
- Chromosome
- scaffold_1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000032 1498 genes in 25 species
- Duplication type
- Block duplicate
- Description
- PACid=17321081;name=POPTR_0001s15280;alias=pt040225m,grail3.0029008201,Pt-RAB1.5;
- Comment
- transcripteqprotein_id17321081Protein informationCannot create amino acid sequence
- Gene structure
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR006688 ADP-ribosylation factor IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR020851 Small GTPase IPR001806 Ras GTPase IPR005225 Small GTP-binding protein IPR013753 Ras IPR006762 Gtr1/RagA G protein IPR019009 Signal recognition particle receptor, beta subunit