Gene Overview 
General information
- Gene id
- PT00G05390
- Species
- Populus trichocarpa
- Transcript
- PT00G05390.1
- Coordinates
- 12448 - 16256
- Strand
- positive
- Chromosome
- scaffold_107
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- singleton
- Description
- PACid=17332849;name=POPTR_0107s00230;alias=pt034924m,gw1.133.211.1;
- Comment
- transcripteqProtein informationprotein_id17332849
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001480 Curculin-like (mannose-binding) lectin IPR003609 Apple-like IPR002290 Serine/threonine-protein kinase domain IPR020635 Tyrosine-protein kinase, catalytic domain IPR001245 Serine/threonine/tyrosine-protein kinase IPR000858 S-locus glycoprotein IPR013227 PAN-2 domain IPR021820 S-locus receptor kinase, C-terminal IPR000719 Protein kinase, catalytic domain IPR011009 Protein kinase-like domain