Gene Overview 
General information
- Gene id
- PPCG00680
- Species
- Physcomitrella patens
- Transcript
- PPCG00680.1
- Coordinates
- 57322 - 58854
- Strand
- negative
- Chromosome
- chloroplast
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM017738 3 genes in 3 species
- Description
- chlB;protochlorophyllide reductase ChlB subunit;protein_id=BAC85061.1;
- Comment
- transl_table11Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0019685 photosynthesis, dark reaction C_Hunter 2 3 54 0.0000915473 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR013580 Proto-chlorophyllide/chlorophyllide reductase, C-terminal IPR005969 Light-independent protochlorophyllide reductase, B subunit IPR016209 Protochlorophyllide reductase, ChlB, light independent IPR000510 Nitrogenase/oxidoreductase, component 1