Gene Overview 
General information
- Gene id
- OSINDICA_04G46890
- Species
- Oryza sativa ssp. indica
- Transcript
- OSINDICA_04G46890.1
- Coordinates
- 31550418 - 31556673
- Strand
- negative
- Chromosome
- Chr04
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000326 267 genes in 20 species
- Sub family
- ORTHO000032 195 genes in 20 species
- Duplication type
- Tandem duplicate
- Description
- source=BGI China;type=FgeneSH;
- Comment
- transcripteqnameOsIFCC018976Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0044238 primary metabolic process C_Hunter 3 68 261 0.0000599382 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002772 Glycoside hydrolase, family 3, C-terminal IPR001764 Glycoside hydrolase, family 3, N-terminal IPR017853 Glycoside hydrolase, catalytic core