Gene Overview 
General information
- Gene id
- OSINDICA_01G06540
- Species
- Oryza sativa ssp. indica
- Transcript
- OSINDICA_01G06540.1
- Coordinates
- 3769941 - 3779697
- Strand
- negative
- Chromosome
- Chr01
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM004070 34 genes in 23 species
- Sub family
- ORTHO005874 25 genes in 23 species
- Description
- source=BGI China;type=FgeneSH;
- Comment
- transcripteqnameOsIFCC000437Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR015252 DNA recombination/repair protein BRCA2, helical domain IPR016027 Nucleic acid-binding, OB-fold-like IPR015187 BRCA2, oligonucleotide/oligosaccharide-binding 1 IPR002093 BRCA2 repeat IPR015525 Breast cancer type 2 susceptibility protein