Gene Overview 
General information
- Gene id
- OS07G46860
- Species
- Oryza sativa ssp. japonica
- Transcript
- OS07G46860.1
- Coordinates
- 28012827 - 28013690
- Strand
- positive
- Chromosome
- 7
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000051 1094 genes in 23 species
- Sub family
- ORTHO067140 2 genes in 2 species
- Duplication type
- Tandem duplicate
- Description
- sex determination protein tasselseed%2D2, putative, expressed
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0016491 oxidoreductase activity C_Hunter 1 13 17 0.000000000000189049 GO:0016491 oxidoreductase activity C_Hunter 3 13 17 0.000000000000189049 GO:0003824 catalytic activity C_Hunter 3 83 300 0.00000366589 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR020842 Polyketide synthase/Fatty acid synthase, KR IPR016040 NAD(P)-binding domain