Gene Overview 
General information
- Gene id
- MT2G006440
- Species
- Medicago truncatula
- Transcript
- MT2G006440.1
- Coordinates
- 576335 - 583843
- Strand
- positive
- Chromosome
- 2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000618 164 genes in 24 species
- Sub family
- ORTHO005483 25 genes in 22 species
- Duplication type
- Tandem duplicate
- Description
- ATP-dependent DNA helicase Q1 (AHRD V1 *-** P46063); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type
- Comment
- transcripteqProtein idMedtr2g006440.1Protein informationCannot create amino acid sequence
- Gene structure
-
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002121 Helicase/RNase D C-terminal, HRDC domain IPR014021 Helicase, superfamily 1/2, ATP-binding domain IPR001650 DNA/RNA helicase, C-terminal IPR018329 DNA helicase, ATP-dependent, RecQ type, N-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR018982 RQC domain IPR004589 DNA helicase, ATP-dependent, RecQ type IPR010997 HRDC-like IPR014001 DEAD-like helicase, N-terminal