Gene Overview 
General information
- Gene id
- MT0G07430
- Species
- Medicago truncatula
- Transcript
- MT0G07430.1
- Coordinates
- 155679 - 156007
- Strand
- negative
- Chromosome
- AC202489.12
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000070 895 genes in 20 species
- Description
- Polygalacturonase (AHRD V1 ***- Q68UW1_PYRCO); contains Interpro domain(s) IPR012334 Pectin lyase fold
- Comment
- transcripteqProtein idAC202489_37.1Protein informationCannot create amino acid sequence
- Gene structure
-
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR012334 Pectin lyase fold IPR011050 Pectin lyase fold/virulence factor IPR000743 Glycoside hydrolase, family 28