Gene Overview 
General information
- Gene id
- ME07478G00550
- Species
- Manihot esculenta
- Transcript
- ME07478G00550.1
- Coordinates
- 491851 - 496537
- Strand
- positive
- Chromosome
- scaffold07478
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000102 649 genes in 25 species
- Sub family
- ORTHO000688 50 genes in 18 species
- Duplication type
- Block duplicate
- Comment
- PACid17984928RNAnamecassava4.1_033529mGeneNamecassava4.1_033529m.gtranscripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR000595 Cyclic nucleotide-binding IPR002110 Ankyrin repeat IPR020683 Ankyrin repeat-containing domain IPR014710 RmlC-like jelly roll fold IPR018490 Cyclic nucleotide-binding-like IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG IPR005821 Ion transport IPR021789 Protein of unknown function DUF3354