Gene Overview  


General information


Gene id
ME05875G01560
Species
Manihot esculenta
Transcript
ME05875G01560.1
Coordinates
1234220 - 1238507
Strand
negative
Chromosome
scaffold05875
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM001299   89 genes in 25 species
Sub family
ORTHO001220   40 genes in 23 species
Duplication type
Block duplicate
Comment
PACid
17973117
 
RNAname
cassava4.1_006577m
 
GeneName
cassava4.1_006577m.g
 
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR001176 1-aminocyclopropane-1-carboxylate synthase
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
IPR004839 Aminotransferase, class I/II
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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