Gene Overview 
General information
- Gene id
- ME02817G00160
- Species
- Manihot esculenta
- Transcript
- ME02817G00160.1
- Coordinates
- 133348 - 141685
- Strand
- negative
- Chromosome
- scaffold02817
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000618 164 genes in 24 species
- Sub family
- ORTHO005483 25 genes in 22 species
- Comment
- PACid17983777RNAnamecassava4.1_027527mGeneNamecassava4.1_027527m.gtranscripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001650 DNA/RNA helicase, C-terminal IPR018982 RQC domain IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR002121 Helicase/RNase D C-terminal, HRDC domain IPR004589 DNA helicase, ATP-dependent, RecQ type IPR014021 Helicase, superfamily 1/2, ATP-binding domain IPR014001 DEAD-like helicase, N-terminal IPR018329 DNA helicase, ATP-dependent, RecQ type, N-terminal