Gene Overview 
General information
- Gene id
- MD00G344830
- Species
- Malus domestica
- Transcript
- MD00G344830.1
- Coordinates
- 2755 - 7938
- Strand
- positive
- Chromosome
- MDC015435.203
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM002078 60 genes in 24 species
- Sub family
- ORTHO005901 25 genes in 23 species
- Comment
- transcripteqProtein idMDP0000230638Transcript idMDP0000230638contigMDC015435.203Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR012162 Polyribonucleotide nucleotidyltransferase IPR015848 Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type IPR012340 Nucleic acid-binding, OB-fold IPR003029 Ribosomal protein S1, RNA binding domain IPR001247 Exoribonuclease, phosphorolytic domain 1 IPR015847 Exoribonuclease, phosphorolytic domain 2 IPR020568 Ribosomal protein S5 domain 2-type fold IPR016027 Nucleic acid-binding, OB-fold-like