Gene Overview 
General information
- Gene id
- MD00G142500
- Species
- Malus domestica
- Transcript
- MD00G142500.1
- Coordinates
- 1010 - 6427
- Strand
- positive
- Chromosome
- MDC006110.110
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM002501 51 genes in 23 species
- Sub family
- ORTHO001321 39 genes in 23 species
- Comment
- transcripteqProtein idMDP0000280567Transcript idMDP0000280567contigMDC006110.110Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002119 Histone H2A IPR015943 WD40/YVTN repeat-like-containing domain IPR009072 Histone-fold IPR019781 WD40 repeat, subgroup IPR007125 Histone core IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat