Gene Overview 
General information
- Gene id
- LJ4G023450
- Species
- Lotus japonicus
- Transcript
- LJ4G023450.1
- Coordinates
- 39180248 - 39184735
- Strand
- negative
- Chromosome
- chr4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM001318 88 genes in 25 species
- Sub family
- ORTHO001445 38 genes in 24 species
- Comment
- transcripteqscaffoldCM0421namechr4.CM0421.390.ncProtein informationCannot create amino acid sequence
- Gene structure
-
Loading...please wait
previous gene
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- Functional clusters
-
GO term Description Type Experiment Cluster size Number of genes E-value GO:0006139 cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process C_Hunter 3 11 38 0.0000170463 - InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR018149 Lysyl-tRNA synthetase, class II, C-terminal IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) IPR004365 Nucleic acid binding, OB-fold, tRNA/helicase-type IPR002313 Lysyl-tRNA synthetase, class II IPR006195 Aminoacyl-tRNA synthetase, class II, conserved domain IPR012340 Nucleic acid-binding, OB-fold IPR016027 Nucleic acid-binding, OB-fold-like