Gene Overview 
General information
- Gene id
- LJ1G057420
- Species
- Lotus japonicus
- Transcript
- LJ1G057420.1
- Coordinates
- 86858279 - 86860399
- Strand
- negative
- Chromosome
- chr1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000097 705 genes in 22 species
- Sub family
- ORTHO004752 27 genes in 10 species
- Duplication type
- Tandem duplicate and Block duplicate
- Comment
- transcripteqscaffoldCM0105namechr1.CM0105.640.ncProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0008168 methyltransferase activity C_Hunter 1 4 7 0.000173335 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR001077 O-methyltransferase, family 2 IPR012967 Plant methyltransferase dimerisation IPR016461 O-methyltransferase, COMT, eukaryota IPR011991 Winged helix-turn-helix transcription repressor DNA-binding