Gene Overview 
General information
- Gene id
- FV0G24250
- Species
- Fragaria vesca
- Transcript
- FV0G24250.1
- Coordinates
- 1988959 - 1990275
- Strand
- negative
- Chromosome
- scf0513168
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000037 1344 genes in 25 species
- Sub family
- ORTHO034013 3 genes in 1 species
- Duplication type
- Tandem duplicate
- Description
- Aspartic proteinase nepenthesin-2, Precursor (probable)
- Comment
- transcripteqProtein idgene16442Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0004190 aspartic-type endopeptidase activity C_Hunter 1 4 11 0.000559756 GO:0004175 endopeptidase activity C_Hunter 3 11 184 0.0000889103 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR009007 Peptidase aspartic, catalytic IPR021109 Peptidase aspartic IPR001461 Peptidase A1