Gene Overview 
General information
- Gene id
- CP00051G00170
- Species
- Carica papaya
- Transcript
- CP00051G00170.1
- Coordinates
- 215916 - 217208
- Strand
- negative
- Chromosome
- supercontig_51
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000163 439 genes in 20 species
- Sub family
- ORTHO001877 35 genes in 17 species
- Comment
- nameevm.TU.supercontig_51.17Protein idevm.TU.supercontig_51.17transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR002022 Pectate lyase/Amb allergen IPR011050 Pectin lyase fold/virulence factor IPR018082 AmbAllergen IPR012334 Pectin lyase fold