Gene Overview 
General information
- Gene id
- BDCG00980
- Species
- Brachypodium distachyon
- Transcript
- BDCG00980.1
- Coordinates
- 101058 - 103283
- Strand
- negative
- Chromosome
- chloroplast
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM001016 111 genes in 23 species
- Sub family
- ORTHO003686 28 genes in 19 species
- Description
- ndhF;NADH dehydrogenase subunit 5;protein_id=ACF08684.1;
- Comment
- transl_table11Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0022904 respiratory electron transport chain C_Hunter 1 7 52 0.0000000000032226 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR003945 NADH-plastoquinone oxidoreductase, chain 5 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal IPR003916 NADH:ubiquinone oxidoreductase, chain 5 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase