Gene Overview 
General information
- Gene id
- BD5G12060
- Species
- Brachypodium distachyon
- Transcript
- BD5G12060.1
- Coordinates
- 15558901 - 15562360
- Strand
- negative
- Chromosome
- Bd5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000040 1309 genes in 25 species
- Sub family
- ORTHO023354 5 genes in 5 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- glucose transmembrane transporter activity, galactose transmembrane transporter activity, sugar:hydrogen symporter activity, fructose transmembrane transporter activity, mannose transmembrane transporter activity (Blast2GO)
- Comment
- Protein idBradi5g12060.1Transcript idBradi5g12060.1GeneNameBradi5g12060transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0022891 substrate-specific transmembrane transporter activity C_Hunter 1 6 6 0.000000566371 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR016196 Major facilitator superfamily, general substrate transporter IPR003663 Sugar/inositol transporter