Gene Overview  


General information


Gene id
ATCG00800
Species
Arabidopsis thaliana
Transcript
ATCG00800.1
Coordinates
82826 - 83482
Strand
negative
Chromosome
chloroplast
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000739   146 genes in 23 species
Sub family
ORTHO001954   34 genes in 21 species
Duplication type
Tandem duplicate
Description
encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex;structural constituent of ribosome
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0033279ribosomal subunitC_Hunter130701.151e-40
GO:0044435plastid partC_Hunter129393.65178e-29
GO:0044237cellular metabolic processC_Hunter31161334.13192e-57
InterPro domain(s)
Interpro idDescription
IPR004044 K Homology, type 2
IPR015946 K homology-like, alpha/beta
IPR001351 Ribosomal protein S3, C-terminal
IPR009019 K Homology, prokaryotic type
IPR008282 Ribosomal protein S3, N-terminal
IPR005704 Ribosomal protein S3, bacterial
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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