Gene Overview  


General information


Gene id
ATCG00490
Species
Arabidopsis thaliana
Transcript
ATCG00490.1
Coordinates
54958 - 56397
Strand
positive
Chromosome
chloroplast
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000775   140 genes in 23 species
Sub family
ORTHO001077   42 genes in 23 species
Description
large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.;ribulose-bisphosphate carboxylases
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044435plastid partC_Hunter129393.65178e-29
InterPro domain(s)
Interpro idDescription
IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal
IPR020878 Ribulose bisphosphate carboxylase, large chain, active site
IPR017444 Ribulose bisphosphate carboxylase, large subunit, N-terminal
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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