Gene Overview  


General information


Gene id
AT5G62680
Species
Arabidopsis thaliana
Transcript
AT5G62680.1
Coordinates
25165430 - 25167822
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000031   1620 genes in 22 species
Sub family
ORTHO000697   49 genes in 17 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR016196 Major facilitator superfamily, general substrate transporter
IPR000109 Oligopeptide transporter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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