Gene Overview 
General information
- Gene id
- AT5G62680
- Species
- Arabidopsis thaliana
- Transcript
- AT5G62680.1
- Coordinates
- 25165430 - 25167822
- Strand
- negative
- Chromosome
- 5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000031 1620 genes in 22 species
- Sub family
- ORTHO000697 49 genes in 17 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR016196 Major facilitator superfamily, general substrate transporter IPR000109 Oligopeptide transporter