Gene Overview  


General information


Gene id
AT5G62520
Species
Arabidopsis thaliana
Transcript
AT5G62520.1
Coordinates
25098071 - 25099264
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000837   131 genes in 19 species
Sub family
ORTHO012701   15 genes in 12 species
Duplication type
Block duplicate
Description
Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.;similar to RCD one 5
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR022003 RST domain of plant C-terminal
IPR012317 Poly(ADP-ribose) polymerase, catalytic domain
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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