Gene Overview  


General information


Gene id
AT5G60860
Species
Arabidopsis thaliana
Transcript
AT5G60860.1
Coordinates
24484750 - 24485565
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO009678   20 genes in 16 species
Description
RAB GTPase homolog A1F (RABA1f); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1G (TAIR:AT3G15060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RAB GTPase homolog A1F
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0050794regulation of cellular processC_Hunter3593000.000853368
InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR003579 Ras small GTPase, Rab type
IPR013753 Ras
IPR015595 Rab11-related
IPR020851 Small GTPase
IPR001806 Ras GTPase
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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