Gene Overview  


General information


Gene id
AT5G48940
Species
Arabidopsis thaliana
Transcript
AT5G48940.1
Coordinates
19839785 - 19843744
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000002   5123 genes in 25 species
Sub family
ORTHO000086   126 genes in 19 species
Description
Leucine-rich repeat transmembrane protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT3G24240.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Leucine-rich repeat transmembrane protein kinase family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

Loading...please wait

Toolbox


Functional annotation information


GO term(s)
Loading....please wait
InterPro domain(s)
Interpro idDescription
IPR008271 Serine/threonine-protein kinase, active site
IPR001611 Leucine-rich repeat
IPR020474 Toll-like receptor, leucine rich repeat-containing
IPR011009 Protein kinase-like domain
IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2
IPR017442 Serine/threonine-protein kinase-like domain
IPR000719 Protein kinase, catalytic domain
IPR017441 Protein kinase, ATP binding site
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found