Gene Overview  


General information


Gene id
AT5G46040
Species
Arabidopsis thaliana
Transcript
AT5G46040.1
Coordinates
18671397 - 18673551
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000031   1620 genes in 22 species
Sub family
ORTHO000309   70 genes in 18 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 3 (TAIR:AT5G46050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Major facilitator superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR016196 Major facilitator superfamily, general substrate transporter
IPR000109 Oligopeptide transporter
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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