Gene Overview 
General information
- Gene id
- AT5G45300
- Species
- Arabidopsis thaliana
- Transcript
- AT5G45300.1
- Coordinates
- 18353636 - 18356696
- Strand
- positive
- Chromosome
- 5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000363 248 genes in 25 species
- Sub family
- ORTHO011521 17 genes in 16 species
- Description
- beta-amylase 2 (BMY2); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 1218 Blast hits to 1198 proteins in 187 species: Archae - 0; Bacteria - 92; Metazoa - 210; Fungi - 10; Plants - 824; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).;beta-amylase 2
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
Loading...please wait
previous gene
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR001554 Glycoside hydrolase, family 14 IPR008540 BZR1, transcriptional repressor IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR017853 Glycoside hydrolase, catalytic core