Gene Overview  


General information


Gene id
AT5G45300
Species
Arabidopsis thaliana
Transcript
AT5G45300.1
Coordinates
18353636 - 18356696
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000363   248 genes in 25 species
Sub family
ORTHO011521   17 genes in 16 species
Description
beta-amylase 2 (BMY2); FUNCTIONS IN: cation binding, beta-amylase activity, catalytic activity; INVOLVED IN: cellulose biosynthetic process, carbohydrate metabolic process, polysaccharide catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 14 (InterPro:IPR001554), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: beta-amylase 7 (TAIR:AT2G45880.1); Has 1218 Blast hits to 1198 proteins in 187 species: Archae - 0; Bacteria - 92; Metazoa - 210; Fungi - 10; Plants - 824; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).;beta-amylase 2
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR001554 Glycoside hydrolase, family 14
IPR008540 BZR1, transcriptional repressor
IPR013781 Glycoside hydrolase, subgroup, catalytic core
IPR017853 Glycoside hydrolase, catalytic core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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