Gene Overview  


General information


Gene id
AT5G42380
Species
Arabidopsis thaliana
Transcript
AT5G42380.1
Coordinates
16942758 - 16943315
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000014   2098 genes in 25 species
Sub family
ORTHO015264   10 genes in 9 species
Description
calmodulin like 37 (CML37); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to ozone; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;calmodulin like 37
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR002048 Calcium-binding EF-hand
IPR018247 EF-Hand 1, calcium-binding site
IPR011992 EF-hand-like domain
IPR018248 EF-Hand, Calmodulin
IPR018249 EF-HAND 2
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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