Gene Overview  


General information


Gene id
AT5G41670
Species
Arabidopsis thaliana
Transcript
AT5G41670.1
Coordinates
16665647 - 16667110
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM001494   79 genes in 25 species
Sub family
ORTHO000439   59 genes in 25 species
Duplication type
Block duplicate
Description
6-phosphogluconate dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: response to fructose stimulus, response to cadmium ion, response to sucrose stimulus, response to glucose stimulus; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: 6-phosphogluconate dehydrogenase, NAD-binding (InterPro:IPR006115), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), Dehydrogenase, multihelical (InterPro:IPR013328), 6-phosphogluconate dehydrogenase, decarboxylating (InterPro:IPR006113), 6-phosphogluconate dehydrogenase, C-terminal (InterPro:IPR006114), 6-phosphogluconate dehydrogenase (InterPro:IPR006183), NAD(P)-binding domain (InterPro:IPR016040), Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension (InterPro:IPR012284); BEST Arabidopsis thaliana protein match is: 6-phosphogluconate dehydrogenase family protein (TAIR:AT1G64190.1); Has 12747 Blast hits to 12577 proteins in 2621 species: Archae - 86; Bacteria - 8556; Metazoa - 692; Fungi - 242; Plants - 329; Viruses - 4; Other Eukaryotes - 2838 (source: NCBI BLink).;6-phosphogluconate dehydrogenase family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR016040 NAD(P)-binding domain
IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension
IPR006113 6-phosphogluconate dehydrogenase, decarboxylating
IPR006115 6-phosphogluconate dehydrogenase, NAD-binding
IPR013328 Dehydrogenase, multihelical
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
IPR006114 6-phosphogluconate dehydrogenase, C-terminal
IPR006183 6-phosphogluconate dehydrogenase
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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