Gene Overview  


General information


Gene id
AT5G40220
Species
Arabidopsis thaliana
Transcript
AT5G40220.1
Coordinates
16078390 - 16079364
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM004512   31 genes in 5 species
Sub family
ORTHO018876   6 genes in 2 species
Duplication type
Tandem duplicate
Description
AGAMOUS-like 43 (AGL43); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 75 (TAIR:AT5G41200.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;AGAMOUS-like 43
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR002100 Transcription factor, MADS-box
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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