Gene Overview  


General information


Gene id
AT5G39290
Species
Arabidopsis thaliana
Transcript
AT5G39290.1
Coordinates
15735871 - 15736908
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000065   916 genes in 22 species
Sub family
ORTHO005823   25 genes in 12 species
Duplication type
Tandem duplicate
Description
member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio);expansin A26
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Toolbox


Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0009664plant-type cell wall organizationC_Hunter1660.00000000000167783
InterPro domain(s)
Interpro idDescription
IPR007117 Pollen allergen/expansin, C-terminal
IPR005132 Rare lipoprotein A
IPR014734 Pollen allergen, N-terminal
IPR009009 Barwin-related endoglucanase
IPR002963 Expansin
IPR007118 Expansin/Lol pI
IPR007112 Expansin 45, endoglucanase-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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