Gene Overview  


General information


Gene id
AT5G38910
Species
Arabidopsis thaliana
Transcript
AT5G38910.1
Coordinates
15578811 - 15579584
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000084   796 genes in 20 species
Sub family
ORTHO046138   2 genes in 2 species
Duplication type
Tandem duplicate
Description
RmlC-like cupins superfamily protein; FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, apoplast; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G38940.1); Has 1503 Blast hits to 1497 proteins in 89 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 37; Plants - 1447; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).;RmlC-like cupins superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR011051 Cupin, RmlC-type
IPR001929 Germin
IPR006045 Cupin 1
IPR019780 Germin, manganese binding site
IPR014710 RmlC-like jelly roll fold
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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