Gene Overview  


General information


Gene id
AT5G38500
Species
Arabidopsis thaliana
Transcript
AT5G38500.1
Coordinates
15416018 - 15417253
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM002392   54 genes in 10 species
Sub family
ORTHO025989   4 genes in 2 species
Duplication type
Tandem duplicate
Description
FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508), Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT5G38490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Domain of unknown function (DUF313)
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR005508 Protein of unknown function DUF313
IPR003340 Transcriptional factor B3
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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