Gene Overview  


General information


Gene id
AT5G37280
Species
Arabidopsis thaliana
Transcript
AT5G37280.1
Coordinates
14761275 - 14761925
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM005849   24 genes in 2 species
Sub family
ORTHO046056   2 genes in 2 species
Duplication type
Tandem duplicate
Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G37200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RING/U-box superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0030528transcription regulator activityC_Hunter115370.0000253553
GO:0030528transcription regulator activityC_Hunter315370.0000253553
InterPro domain(s)
Interpro idDescription
IPR018957 Zinc finger, C3HC4 RING-type
IPR001841 Zinc finger, RING-type
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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