Gene Overview  


General information


Gene id
AT5G27944
Species
Arabidopsis thaliana
Transcript
AT5G27944.1
Coordinates
9975918 - 9976592
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM004512   31 genes in 5 species
Sub family
ORTHO046794   2 genes in 1 species
Description
MADS-box transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 89 (TAIR:AT5G27580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;MADS-box transcription factor family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR002100 Transcription factor, MADS-box
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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