Gene Overview  


General information


Gene id
AT5G27720
Species
Arabidopsis thaliana
Transcript
AT5G27720.1
Coordinates
9815904 - 9817304
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM003438   38 genes in 24 species
Description
embryo defective 1644 (emb1644); CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein (LSM) domain (InterPro:IPR001163), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro:IPR010920), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro:IPR006649); BEST Arabidopsis thaliana protein match is: snRNP core protein SMD3 (TAIR:AT1G76300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Small nuclear ribonucleoprotein family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type
IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain
IPR001163 Like-Sm ribonucleoprotein (LSM) domain
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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