Gene Overview  


General information


Gene id
AT5G24120
Species
Arabidopsis thaliana
Transcript
AT5G24120.1
Coordinates
8157794 - 8159746
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM005328   27 genes in 20 species
Description
Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.;sigma factor E
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR007624 RNA polymerase sigma-70 region 3
IPR014284 RNA polymerase sigma-70
IPR007627 RNA polymerase sigma-70 region 2
IPR007630 RNA polymerase sigma-70 region 4
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding
IPR000943 RNA polymerase sigma-70 factor
IPR013324 RNA polymerase sigma factor, region 3/4
IPR013325 RNA polymerase sigma factor, region 2
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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