Gene Overview 
General information
- Gene id
- AT5G18550
- Species
- Arabidopsis thaliana
- Transcript
- AT5G18550.1
- Coordinates
- 6160515 - 6162729
- Strand
- positive
- Chromosome
- 5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000396 233 genes in 22 species
- Sub family
- ORTHO045128 2 genes in 2 species
- Duplication type
- Block duplicate
- Description
- Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT3G06410.1); Has 2990 Blast hits to 1278 proteins in 210 species: Archae - 0; Bacteria - 30; Metazoa - 599; Fungi - 302; Plants - 1043; Viruses - 0; Other Eukaryotes - 1016 (source: NCBI BLink).;Zinc finger C-x8-C-x5-C-x3-H type family protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
-
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View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR000571 Zinc finger, CCCH-type