Gene Overview  


General information


Gene id
AT5G13930
Species
Arabidopsis thaliana
Transcript
AT5G13930.1
Coordinates
4488762 - 4490035
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000238   331 genes in 20 species
Sub family
ORTHO000100   115 genes in 20 species
Description
Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.;Chalcone and stilbene synthase family protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter41302250.0000335911
InterPro domain(s)
Interpro idDescription
IPR001099 Chalcone/stilbene synthase, N-terminal
IPR012328 Chalcone/stilbene synthase, C-terminal
IPR011141 Polyketide synthase, type III
IPR016038 Thiolase-like, subgroup
IPR016039 Thiolase-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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