Gene Overview  


General information


Gene id
AT5G08565
Species
Arabidopsis thaliana
Transcript
AT5G08565.1
Coordinates
2775964 - 2777154
Strand
positive
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM003634   37 genes in 24 species
Sub family
ORTHO002251   33 genes in 24 species
Duplication type
Block duplicate
Description
Transcription initiation Spt4-like protein; FUNCTIONS IN: positive transcription elongation factor activity, zinc ion binding; INVOLVED IN: positive regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Transcription initiation Spt4 (InterPro:IPR009287), Transcription initiation Spt4-like (InterPro:IPR016046); BEST Arabidopsis thaliana protein match is: SPT4 homolog 2 (TAIR:AT5G63670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Transcription initiation Spt4-like protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR009287 Transcription initiation Spt4
IPR016046 Transcription initiation Spt4-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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