Gene Overview  


General information


Gene id
AT5G03850
Species
Arabidopsis thaliana
Transcript
AT5G03850.1
Coordinates
1028542 - 1028736
Strand
negative
Chromosome
5
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM002139   59 genes in 24 species
Sub family
ORTHO000934   44 genes in 22 species
Duplication type
Block duplicate
Description
Nucleic acid-binding, OB-fold-like protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: cytosolic small ribosomal subunit, ribosome, cell wall, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Ribosomal protein S28e (InterPro:IPR000289); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT3G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Nucleic acid-binding, OB-fold-like protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR000289 Ribosomal protein S28e
IPR012340 Nucleic acid-binding, OB-fold
IPR016027 Nucleic acid-binding, OB-fold-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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