Gene Overview  


General information


Gene id
AT4G39890
Species
Arabidopsis thaliana
Transcript
AT4G39890.1
Coordinates
18506112 - 18507459
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000032   1498 genes in 25 species
Sub family
ORTHO045527   2 genes in 2 species
Duplication type
Tandem duplicate   and   Block duplicate
Description
RAB GTPase homolog H1C (RABH1c); FUNCTIONS IN: protein binding, GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1D (TAIR:AT2G22290.1); Has 29075 Blast hits to 29047 proteins in 763 species: Archae - 19; Bacteria - 140; Metazoa - 15282; Fungi - 4003; Plants - 3503; Viruses - 20; Other Eukaryotes - 6108 (source: NCBI BLink).;RAB GTPase homolog H1C
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR005225 Small GTP-binding protein
IPR003579 Ras small GTPase, Rab type
IPR013753 Ras
IPR020851 Small GTPase
IPR001806 Ras GTPase
IPR015600 Rab6-related
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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