Gene Overview  


General information


Gene id
AT4G39850
Species
Arabidopsis thaliana
Transcript
AT4G39850.3
Coordinates
18489220 - 18496762
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM002357   54 genes in 23 species
Sub family
ORTHO001603   37 genes in 23 species
Description
Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.;peroxisomal ABC transporter 1
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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InterPro domain(s)
Interpro idDescription
IPR011527 ABC transporter, transmembrane domain, type 1
IPR010509 ABC transporter, N-terminal
IPR003439 ABC transporter-like
IPR017940 ABC transporter integral membrane type 1
IPR003593 ATPase, AAA+ type, core
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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