Gene Overview  


General information


Gene id
AT4G38480
Species
Arabidopsis thaliana
Transcript
AT4G38480.1
Coordinates
18003957 - 18006002
Strand
positive
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM002081   60 genes in 25 species
Sub family
ORTHO045497   2 genes in 2 species
Duplication type
Block duplicate
Description
Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter4921610.000985748
InterPro domain(s)
Interpro idDescription
IPR011046 WD40 repeat-like-containing domain
IPR019781 WD40 repeat, subgroup
IPR015943 WD40/YVTN repeat-like-containing domain
IPR019782 WD40 repeat 2
IPR017986 WD40-repeat-containing domain
IPR001680 WD40 repeat
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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