Gene Overview 
General information
- Gene id
- AT4G37460
- Species
- Arabidopsis thaliana
- Transcript
- AT4G37460.1
- Coordinates
- 17608623 - 17615534
- Strand
- negative
- Chromosome
- 4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM003940 34 genes in 20 species
- Sub family
- ORTHO004051 28 genes in 20 species
- Description
- Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms.Involved in mediating effector-triggered immunity.;Tetratricopeptide repeat (TPR)-like superfamily protein
- Comment
- transcripteqProtein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0050896 response to stimulus C_Hunter 3 71 251 0.00099388 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR011990 Tetratricopeptide-like helical IPR019734 Tetratricopeptide repeat IPR013026 Tetratricopeptide repeat-containing IPR001440 Tetratricopeptide TPR-1