Gene Overview 
General information
- Gene id
- AT4G34460
- Species
- Arabidopsis thaliana
- Transcript
- AT4G34460.1
- Coordinates
- 16477393 - 16479266
- Strand
- negative
- Chromosome
- 4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM001608 73 genes in 24 species
- Sub family
- ORTHO007398 23 genes in 18 species
- Duplication type
- Tandem duplicate and Block duplicate
- Description
- Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase;GTP binding protein beta 1
- Comment
- transcripteqProtein information
- Gene structure
-
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
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- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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Interpro id Description IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR016346 Guanine nucleotide-binding protein, beta subunit IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR001632 G-protein, beta subunit IPR020472 G-protein beta WD-40 repeat, region IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain