Gene Overview  


General information


Gene id
AT4G29940
Species
Arabidopsis thaliana
Transcript
AT4G29940.1
Coordinates
14648346 - 14652710
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM002038   61 genes in 23 species
Sub family
ORTHO004615   27 genes in 20 species
Description
Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding.;pathogenesis related homeodomain protein A
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter31482070.00000165422
InterPro domain(s)
Interpro idDescription
IPR001356 Homeobox
IPR011011 Zinc finger, FYVE/PHD-type
IPR019786 Zinc finger, PHD-type, conserved site
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
IPR012287 Homeodomain-related
IPR009057 Homeodomain-like
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


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