Gene Overview  


General information


Gene id
AT4G27640
Species
Arabidopsis thaliana
Transcript
AT4G27640.1
Coordinates
13798013 - 13802976
Strand
negative
Chromosome
4
Type
Coding gene
Sequence
Show sequence(s)
Gene family
HOM000753   144 genes in 24 species
Sub family
ORTHO003597   29 genes in 22 species
Description
ARM repeat superfamily protein; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Importin-beta, N-terminal (InterPro:IPR001494), Armadillo-like helical (InterPro:IPR011989), HEAT, type 2 (InterPro:IPR021133), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G19820.1); Has 2274 Blast hits to 2138 proteins in 232 species: Archae - 0; Bacteria - 13; Metazoa - 858; Fungi - 732; Plants - 312; Viruses - 0; Other Eukaryotes - 359 (source: NCBI BLink).;ARM repeat superfamily protein
Comment
transcript
eq
 
Protein information
Cannot create amino acid sequence
 
Gene structure

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Functional annotation information


GO term(s)
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Functional clusters
GO termDescriptionTypeExperimentCluster sizeNumber of genesE-value
GO:0044464cell partC_Hunter41252280.000861403
InterPro domain(s)
Interpro idDescription
IPR016024 Armadillo-type fold
IPR001494 Importin-beta, N-terminal
IPR011989 Armadillo-like helical
IPR021133 HEAT, type 2
IPR000357 HEAT
View InterPro domain(s) mapping

Gene ids in other PLAZA versions


No linkout data found